Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPE33PPE family protein PPE33; Belongs to the mycobacterial PPE family. (493 aa)    
Predicted Functional Partners:
PPE32
PPE family protein; Belongs to the mycobacterial PPE family.
  
   
0.909
AroG
Phospho-2-dehydro-3-deoxyheptonate aldolase AroG; Belongs to the class-II DAHP synthase family.
      
 0.599
OpcA
OXPP cycle protein OpcA.
      
 0.595
PE_PGRS9
Hypothetical protein.
      
 0.590
CeoB
TRK system potassium uptake protein CeoB.
      
 0.590
Cyp132
Cytochrome P450 Cyp132.
      
 0.520
FadE33
acyl-CoA dehydrogenase FadE33.
      
 0.520
PPE69
PPE family protein.
      
 0.518
AccD4
propionyl-CoA carboxylase subunit beta AccD.
      
 0.510
RN09_2229
Hypothetical protein.
     
 0.481
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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