Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pks4 | PpsA | RN09_1459 | RN09_3551 | Polyketide beta-ketoacyl synthase. | Phthiocerol synthesis polyketide synthase type I PpsA. | 0.952 |
Pks4 | RN09_0500 | RN09_1459 | RN09_0500 | Polyketide beta-ketoacyl synthase. | Membrane bound polyketide synthase. | 0.998 |
Pks4 | RN09_0501 | RN09_1459 | RN09_0501 | Polyketide beta-ketoacyl synthase. | Membrane bound polyketide synthase; Overlaps another CDS with the same product name. | 0.967 |
Pks4 | RN09_1889 | RN09_1459 | RN09_1889 | Polyketide beta-ketoacyl synthase. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.963 |
Pks4 | RN09_1890 | RN09_1459 | RN09_1890 | Polyketide beta-ketoacyl synthase. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.963 |
Pks4 | RN09_1891 | RN09_1459 | RN09_1891 | Polyketide beta-ketoacyl synthase. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.964 |
Pks4 | RN09_2042 | RN09_1459 | RN09_2042 | Polyketide beta-ketoacyl synthase. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.980 |
Pks4 | RN09_2045 | RN09_1459 | RN09_2045 | Polyketide beta-ketoacyl synthase. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.998 |
Pks4 | RN09_2524 | RN09_1459 | RN09_2524 | Polyketide beta-ketoacyl synthase. | Polyketide synthase; Overlaps another CDS with the same product name; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.954 |
Pks4 | RN09_3037 | RN09_1459 | RN09_3037 | Polyketide beta-ketoacyl synthase. | Hypothetical protein. | 0.896 |
PpsA | Pks4 | RN09_3551 | RN09_1459 | Phthiocerol synthesis polyketide synthase type I PpsA. | Polyketide beta-ketoacyl synthase. | 0.952 |
PpsA | RN09_0500 | RN09_3551 | RN09_0500 | Phthiocerol synthesis polyketide synthase type I PpsA. | Membrane bound polyketide synthase. | 0.997 |
PpsA | RN09_0501 | RN09_3551 | RN09_0501 | Phthiocerol synthesis polyketide synthase type I PpsA. | Membrane bound polyketide synthase; Overlaps another CDS with the same product name. | 0.921 |
PpsA | RN09_1889 | RN09_3551 | RN09_1889 | Phthiocerol synthesis polyketide synthase type I PpsA. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.932 |
PpsA | RN09_1890 | RN09_3551 | RN09_1890 | Phthiocerol synthesis polyketide synthase type I PpsA. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.956 |
PpsA | RN09_1891 | RN09_3551 | RN09_1891 | Phthiocerol synthesis polyketide synthase type I PpsA. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.964 |
PpsA | RN09_2042 | RN09_3551 | RN09_2042 | Phthiocerol synthesis polyketide synthase type I PpsA. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.976 |
PpsA | RN09_2045 | RN09_3551 | RN09_2045 | Phthiocerol synthesis polyketide synthase type I PpsA. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.999 |
PpsA | RN09_2524 | RN09_3551 | RN09_2524 | Phthiocerol synthesis polyketide synthase type I PpsA. | Polyketide synthase; Overlaps another CDS with the same product name; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.995 |
PpsA | RN09_3037 | RN09_3551 | RN09_3037 | Phthiocerol synthesis polyketide synthase type I PpsA. | Hypothetical protein. | 0.918 |
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