STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PlsCBifunctional L-3-phosphoserine phosphatase/1-acyl-sn-glycerol-3-phosphate acyltransferase. (580 aa)    
Predicted Functional Partners:
PlsB2
Glycerol-3-phosphate acyltransferase; Overlaps another CDS with the same product name; Belongs to the GPAT/DAPAT family.
 
 
 0.994
RN09_3046
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
 0.994
RN09_3043
Glycerol-3-phosphate acyltransferase; Overlaps another CDS with the same product name.
 
  
 0.982
PlsB1
Acyltransferase PlsB; Belongs to the GPAT/DAPAT family.
 
 
 0.957
SerC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
  
 
 0.743
CdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.713
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.712
RN09_0500
Membrane bound polyketide synthase.
  
 
 0.671
RN09_2045
Polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.671
gpsA-2
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.666
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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