Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RN09_0973 | RN09_3152 | Hypothetical protein. | Alanine/leucine-rich protein. | 0.530 |
RN09_2056 | RN09_2962 | Hypothetical protein. | Hypothetical protein. | 0.411 |
RN09_2056 | RN09_3150 | Hypothetical protein. | Hypothetical protein. | 0.629 |
RN09_2056 | RN09_3151 | Hypothetical protein. | Hypothetical protein. | 0.626 |
RN09_2056 | RN09_3152 | Hypothetical protein. | Alanine/leucine-rich protein. | 0.682 |
RN09_2960 | RN09_2961 | Hypothetical protein. | Hypothetical protein. | 0.992 |
RN09_2960 | RN09_2962 | Hypothetical protein. | Hypothetical protein. | 0.987 |
RN09_2960 | RN09_3150 | Hypothetical protein. | Hypothetical protein. | 0.582 |
RN09_2960 | RN09_3151 | Hypothetical protein. | Hypothetical protein. | 0.449 |
RN09_2960 | RN09_3152 | Hypothetical protein. | Alanine/leucine-rich protein. | 0.889 |
RN09_2961 | RN09_2960 | Hypothetical protein. | Hypothetical protein. | 0.992 |
RN09_2961 | RN09_2962 | Hypothetical protein. | Hypothetical protein. | 0.996 |
RN09_2961 | RN09_3150 | Hypothetical protein. | Hypothetical protein. | 0.636 |
RN09_2961 | RN09_3151 | Hypothetical protein. | Hypothetical protein. | 0.562 |
RN09_2961 | RN09_3152 | Hypothetical protein. | Alanine/leucine-rich protein. | 0.707 |
RN09_2961 | RN09_3154 | Hypothetical protein. | Hypothetical protein. | 0.825 |
RN09_2962 | RN09_2056 | Hypothetical protein. | Hypothetical protein. | 0.411 |
RN09_2962 | RN09_2960 | Hypothetical protein. | Hypothetical protein. | 0.987 |
RN09_2962 | RN09_2961 | Hypothetical protein. | Hypothetical protein. | 0.996 |
RN09_2962 | RN09_3150 | Hypothetical protein. | Hypothetical protein. | 0.766 |
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