Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PgsA1 | PimA | RN09_3202 | RN09_3200 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | 0.947 |
PgsA1 | RN09_3199 | RN09_3202 | RN09_3199 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Membrane protein. | 0.876 |
PgsA1 | RN09_3201 | RN09_3202 | RN09_3201 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Phosphatidylinositol mannoside acyltransferase. | 0.981 |
PgsA1 | RN09_3203 | RN09_3202 | RN09_3203 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | AP-4-A phosphorylase. | 0.945 |
PgsA1 | RN09_3204 | RN09_3202 | RN09_3204 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | threonine--tRNA ligase. | 0.838 |
PgsA1 | thrS | RN09_3202 | RN09_3205 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | threonine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.829 |
PimA | PgsA1 | RN09_3200 | RN09_3202 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.947 |
PimA | RN09_0050 | RN09_3200 | RN09_0050 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | MFS-type transporter. | 0.421 |
PimA | RN09_2688 | RN09_3200 | RN09_2688 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | Alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase. | 0.936 |
PimA | RN09_3199 | RN09_3200 | RN09_3199 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | Membrane protein. | 0.949 |
PimA | RN09_3201 | RN09_3200 | RN09_3201 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | Phosphatidylinositol mannoside acyltransferase. | 0.999 |
PimA | RN09_3203 | RN09_3200 | RN09_3203 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | AP-4-A phosphorylase. | 0.935 |
PimA | RN09_3204 | RN09_3200 | RN09_3204 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | threonine--tRNA ligase. | 0.812 |
PimA | thrS | RN09_3200 | RN09_3205 | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | threonine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.828 |
PimB | RN09_2160 | RN09_0683 | RN09_2160 | GDP-mannose-dependent alpha-mannosyltransferase. | GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase. | 0.648 |
PimB | RN09_3201 | RN09_0683 | RN09_3201 | GDP-mannose-dependent alpha-mannosyltransferase. | Phosphatidylinositol mannoside acyltransferase. | 0.840 |
RN09_0050 | PimA | RN09_0050 | RN09_3200 | MFS-type transporter. | Alpha-(1-2)-phosphatidylinositol mannosyltransferase. | 0.421 |
RN09_0050 | RN09_3199 | RN09_0050 | RN09_3199 | MFS-type transporter. | Membrane protein. | 0.616 |
RN09_0050 | RN09_3201 | RN09_0050 | RN09_3201 | MFS-type transporter. | Phosphatidylinositol mannoside acyltransferase. | 0.492 |
RN09_2160 | PimB | RN09_2160 | RN09_0683 | GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase. | GDP-mannose-dependent alpha-mannosyltransferase. | 0.648 |
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