Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CtpF | DevR | RN09_2461 | RN09_3808 | Cation transporter ATPase F. | Two component transcriptional regulator DevR. | 0.627 |
CtpF | NarK2 | RN09_2461 | RN09_2138 | Cation transporter ATPase F. | Nitrate/nitrite transporter. | 0.755 |
CtpF | RN09_3216 | RN09_2461 | RN09_3216 | Cation transporter ATPase F. | Universal stress protein; Overlaps another CDS with the same product name. | 0.640 |
CtpF | RN09_3217 | RN09_2461 | RN09_3217 | Cation transporter ATPase F. | Universal stress protein; Overlaps another CDS with the same product name. | 0.877 |
DevR | CtpF | RN09_3808 | RN09_2461 | Two component transcriptional regulator DevR. | Cation transporter ATPase F. | 0.627 |
DevR | HspX | RN09_3808 | RN09_2505 | Two component transcriptional regulator DevR. | Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family. | 0.749 |
DevR | RN09_3216 | RN09_3808 | RN09_3216 | Two component transcriptional regulator DevR. | Universal stress protein; Overlaps another CDS with the same product name. | 0.648 |
DevR | RN09_3217 | RN09_3808 | RN09_3217 | Two component transcriptional regulator DevR. | Universal stress protein; Overlaps another CDS with the same product name. | 0.862 |
HspX | DevR | RN09_2505 | RN09_3808 | Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family. | Two component transcriptional regulator DevR. | 0.749 |
HspX | NarK2 | RN09_2505 | RN09_2138 | Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family. | Nitrate/nitrite transporter. | 0.837 |
HspX | RN09_0852 | RN09_2505 | RN09_0852 | Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family. | Elongation factor Tu; Overlaps another CDS with the same product name. | 0.425 |
HspX | RN09_3216 | RN09_2505 | RN09_3216 | Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family. | Universal stress protein; Overlaps another CDS with the same product name. | 0.655 |
HspX | RN09_3217 | RN09_2505 | RN09_3217 | Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family. | Universal stress protein; Overlaps another CDS with the same product name. | 0.904 |
MoxR1 | RN09_0852 | RN09_1824 | RN09_0852 | Transcriptional regulator MoxR1. | Elongation factor Tu; Overlaps another CDS with the same product name. | 0.585 |
MoxR1 | RN09_3216 | RN09_1824 | RN09_3216 | Transcriptional regulator MoxR1. | Universal stress protein; Overlaps another CDS with the same product name. | 0.577 |
MoxR1 | RN09_3217 | RN09_1824 | RN09_3217 | Transcriptional regulator MoxR1. | Universal stress protein; Overlaps another CDS with the same product name. | 0.577 |
MoxR1 | Tuf | RN09_1824 | RN09_0853 | Transcriptional regulator MoxR1. | Elongation factor Tu; Overlaps another CDS with the same product name. | 0.554 |
MoxR1 | prcA | RN09_1824 | RN09_2594 | Transcriptional regulator MoxR1. | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. | 0.563 |
MoxR1 | tig | RN09_1824 | RN09_3021 | Transcriptional regulator MoxR1. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.573 |
NarK2 | CtpF | RN09_2138 | RN09_2461 | Nitrate/nitrite transporter. | Cation transporter ATPase F. | 0.755 |
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