Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
RN09_3243Arsenic-transport integral membrane protein ArsC; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (159 aa)    
Predicted Functional Partners:
ArsC
Arsenic-transport integral membrane protein ArsC.
  
 0.996
RN09_3241
ArsR family transcriptional regulator.
  
 0.966
RN09_3239
ArsR family transcriptional regulator.
 
  
 0.648
CadI
Cadmium inducible protein CadI.
  
  
 0.626
RN09_1858
Hypothetical protein.
  
 
 0.528
RN09_0402
Transcriptional regulator.
 
 
 0.511
RN09_3244
Hypothetical protein.
       0.505
RN09_2042
Polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.500
RN09_3739
Hydrolase.
  
  
 0.491
RN09_1635
Thioredoxin.
  
 
 0.482
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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