Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN09_3376Alanine-rich oxidoreductase. (43 aa)    
Predicted Functional Partners:
PepR
Zinc protease; Belongs to the peptidase M16 family.
  
    0.687
RN09_3100
Fatty acid synthase; Overlaps another CDS with the same product name.
  
  
 0.648
RN09_3101
Fatty acid synthase; Overlaps another CDS with the same product name.
  
  
 0.648
Fas
Fatty acid synthase; Overlaps another CDS with the same product name.
  
  
 0.648
pnp
Bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.646
RN09_3375
Alanine-rich oxidoreductase.
       0.566
RN09_0500
Membrane bound polyketide synthase.
  
 
 0.513
RN09_2045
Polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.513
RN09_2042
Polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.497
Pks6
Membrane bound polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.495
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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