Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RN09_0954 | RN09_1647 | RN09_0954 | RN09_1647 | Hypothetical protein. | Transcriptional regulator. | 0.500 |
RN09_0954 | RN09_3302 | RN09_0954 | RN09_3302 | Hypothetical protein. | Hypothetical protein. | 0.535 |
RN09_0954 | RN09_3319 | RN09_0954 | RN09_3319 | Hypothetical protein. | Alanine-rich protein. | 0.462 |
RN09_0954 | RN09_3446 | RN09_0954 | RN09_3446 | Hypothetical protein. | Alanine-rich protein. | 0.658 |
RN09_1647 | RN09_0954 | RN09_1647 | RN09_0954 | Transcriptional regulator. | Hypothetical protein. | 0.500 |
RN09_1647 | RN09_3302 | RN09_1647 | RN09_3302 | Transcriptional regulator. | Hypothetical protein. | 0.536 |
RN09_1647 | RN09_3446 | RN09_1647 | RN09_3446 | Transcriptional regulator. | Alanine-rich protein. | 0.586 |
RN09_1647 | RN09_3788 | RN09_1647 | RN09_3788 | Transcriptional regulator. | Hypothetical protein. | 0.626 |
RN09_1647 | RN09_3927 | RN09_1647 | RN09_3927 | Transcriptional regulator. | Hypothetical protein. | 0.716 |
RN09_1647 | RN09_4423 | RN09_1647 | RN09_4423 | Transcriptional regulator. | Secreted protein. | 0.576 |
RN09_1647 | SseC2 | RN09_1647 | RN09_0998 | Transcriptional regulator. | Hypothetical protein. | 0.626 |
RN09_3302 | RN09_0954 | RN09_3302 | RN09_0954 | Hypothetical protein. | Hypothetical protein. | 0.535 |
RN09_3302 | RN09_1647 | RN09_3302 | RN09_1647 | Hypothetical protein. | Transcriptional regulator. | 0.536 |
RN09_3302 | RN09_3446 | RN09_3302 | RN09_3446 | Hypothetical protein. | Alanine-rich protein. | 0.567 |
RN09_3302 | RN09_3788 | RN09_3302 | RN09_3788 | Hypothetical protein. | Hypothetical protein. | 0.401 |
RN09_3302 | RN09_4423 | RN09_3302 | RN09_4423 | Hypothetical protein. | Secreted protein. | 0.507 |
RN09_3302 | SseC2 | RN09_3302 | RN09_0998 | Hypothetical protein. | Hypothetical protein. | 0.401 |
RN09_3319 | RN09_0954 | RN09_3319 | RN09_0954 | Alanine-rich protein. | Hypothetical protein. | 0.462 |
RN09_3319 | RN09_3446 | RN09_3319 | RN09_3446 | Alanine-rich protein. | Alanine-rich protein. | 0.567 |
RN09_3445 | RN09_3446 | RN09_3445 | RN09_3446 | Hypothetical protein. | Alanine-rich protein. | 0.900 |
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