Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PapA5Phthiocerol/phthiodiolone dimycocerosyl transferase. (422 aa)    
Predicted Functional Partners:
RN09_3564
Daunorubicin ABC transporter permease DrrB.
 
  
 0.952
RN09_3562
Daunorubicin ABC transporter ATP-binding protein DrrA.
 
  
 0.948
DrrC
Daunorubicin ABC transporter permease DrrC.
 
  
 0.946
DrrA
Daunorubicin ABC transporter ATP-binding protein DrrA.
  
  
 0.940
PpsE
Phthiocerol synthesis polyketide synthase type I PpsE.
 
  
 0.933
DrrB
Daunorubicin ABC transporter permease DrrB.
  
  
 0.920
RN09_3560
Phthiocerol synthesis polyketide synthase type I PpsD; Overlaps another CDS with the same product name.
 
  
 0.893
PpsD
Phthiocerol synthesis polyketide synthase type I PpsD; Overlaps another CDS with the same product name.
 
  
 0.821
RN09_4774
Alanine/proline-rich protein; Overlaps another CDS with the same product name.
  
     0.731
RN09_2664
Proline-rich membrane protein.
  
     0.717
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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