RN09_4004 protein (Mycobacterium tuberculosis variant africanum)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

RN09_4004

ATP-dependent helicase; Overlaps another CDS with the same product name. (251 aa)

Predicted Functional Partners:

Lhr

0.994

Nei

0.958

RN09_3024

0.691

RN09_4003

0.682

RN09_2693

0.610

RN09_4357

0.601

RadA

0.522

RN09_4396

0.522

RN09_3889

0.490

UvrD2

0.488

Your Current Organism:

Mycobacterium tuberculosis variant africanum

NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lhr	Nei	RN09_4005	RN09_4006	ATP-dependent helicase; Overlaps another CDS with the same product name.	Endonuclease VIII.	0.966
Lhr	RN09_2693	RN09_4005	RN09_2693	ATP-dependent helicase; Overlaps another CDS with the same product name.	Hypothetical protein.	0.610
Lhr	RN09_3024	RN09_4005	RN09_3024	ATP-dependent helicase; Overlaps another CDS with the same product name.	DNA glycosylase; Belongs to the FPG family.	0.691
Lhr	RN09_3889	RN09_4005	RN09_3889	ATP-dependent helicase; Overlaps another CDS with the same product name.	ATP-dependent DNA helicase; Overlaps another CDS with the same product name.	0.540
Lhr	RN09_4003	RN09_4005	RN09_4003	ATP-dependent helicase; Overlaps another CDS with the same product name.	TetR family transcriptional regulator.	0.682
Lhr	RN09_4004	RN09_4005	RN09_4004	ATP-dependent helicase; Overlaps another CDS with the same product name.	ATP-dependent helicase; Overlaps another CDS with the same product name.	0.994
Lhr	RN09_4357	RN09_4005	RN09_4357	ATP-dependent helicase; Overlaps another CDS with the same product name.	Hypothetical protein.	0.601
Lhr	RN09_4396	RN09_4005	RN09_4396	ATP-dependent helicase; Overlaps another CDS with the same product name.	DNA repair protein RadA; Overlaps another CDS with the same product name.	0.522
Lhr	RadA	RN09_4005	RN09_4395	ATP-dependent helicase; Overlaps another CDS with the same product name.	DNA repair protein RadA; Overlaps another CDS with the same product name.	0.522
Lhr	UvrD2	RN09_4005	RN09_3883	ATP-dependent helicase; Overlaps another CDS with the same product name.	ATP-dependent DNA helicase UvrD.	0.488
Nei	Lhr	RN09_4006	RN09_4005	Endonuclease VIII.	ATP-dependent helicase; Overlaps another CDS with the same product name.	0.966
Nei	RN09_2693	RN09_4006	RN09_2693	Endonuclease VIII.	Hypothetical protein.	0.759
Nei	RN09_3024	RN09_4006	RN09_3024	Endonuclease VIII.	DNA glycosylase; Belongs to the FPG family.	0.923
Nei	RN09_4003	RN09_4006	RN09_4003	Endonuclease VIII.	TetR family transcriptional regulator.	0.817
Nei	RN09_4004	RN09_4006	RN09_4004	Endonuclease VIII.	ATP-dependent helicase; Overlaps another CDS with the same product name.	0.958
Nei	RN09_4357	RN09_4006	RN09_4357	Endonuclease VIII.	Hypothetical protein.	0.755
RN09_2693	Lhr	RN09_2693	RN09_4005	Hypothetical protein.	ATP-dependent helicase; Overlaps another CDS with the same product name.	0.610
RN09_2693	Nei	RN09_2693	RN09_4006	Hypothetical protein.	Endonuclease VIII.	0.759
RN09_2693	RN09_3024	RN09_2693	RN09_3024	Hypothetical protein.	DNA glycosylase; Belongs to the FPG family.	0.627
RN09_2693	RN09_3889	RN09_2693	RN09_3889	Hypothetical protein.	ATP-dependent DNA helicase; Overlaps another CDS with the same product name.	0.895