Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RN09_2569 | RN09_4041 | RN09_2569 | RN09_4041 | Hypothetical protein. | Transposase. | 0.496 |
RN09_4040 | RN09_4041 | RN09_4040 | RN09_4041 | Hypothetical protein. | Transposase. | 0.757 |
RN09_4041 | RN09_2569 | RN09_4041 | RN09_2569 | Transposase. | Hypothetical protein. | 0.496 |
RN09_4041 | RN09_4040 | RN09_4041 | RN09_4040 | Transposase. | Hypothetical protein. | 0.757 |
RN09_4041 | RN09_4044 | RN09_4041 | RN09_4044 | Transposase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.481 |
RN09_4041 | moaC-3 | RN09_4041 | RN09_4043 | Transposase. | Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.481 |
RN09_4044 | RN09_4041 | RN09_4044 | RN09_4041 | Pterin-4-alpha-carbinolamine dehydratase. | Transposase. | 0.481 |
RN09_4044 | moaC-3 | RN09_4044 | RN09_4043 | Pterin-4-alpha-carbinolamine dehydratase. | Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.918 |
moaC-3 | RN09_4041 | RN09_4043 | RN09_4041 | Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | Transposase. | 0.481 |
moaC-3 | RN09_4044 | RN09_4043 | RN09_4044 | Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | Pterin-4-alpha-carbinolamine dehydratase. | 0.918 |