Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RN09_4101Oxidoreductase. (123 aa)    
Predicted Functional Partners:
RN09_4100
Hypothetical protein.
     0.888
FixA
Electron transfer flavoprotein subunit beta.
  
 
 0.519
FixB
Electron transfer flavoprotein subunit alpha.
  
 
 0.518
RN09_4102
Hypothetical protein.
       0.515
PlsB1
Acyltransferase PlsB; Belongs to the GPAT/DAPAT family.
    
 0.496
RN09_3043
Glycerol-3-phosphate acyltransferase; Overlaps another CDS with the same product name.
    
 0.496
PlsB2
Glycerol-3-phosphate acyltransferase; Overlaps another CDS with the same product name; Belongs to the GPAT/DAPAT family.
    
 0.496
NuoF
NADH-quinone oxidoreductase subunit F; Overlaps another CDS with the same product name.
   
 0.469
RN09_3827
NADH-quinone oxidoreductase subunit F; Overlaps another CDS with the same product name.
   
 0.469
RN09_3828
NADH-quinone oxidoreductase subunit F; Overlaps another CDS with the same product name.
   
 0.469
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.