BphD protein (Mycobacterium tuberculosis variant africanum)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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Score

BphD

4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase. (115 aa)

Predicted Functional Partners:

BphC

0.998

RN09_4377

0.968

RN09_4378

0.967

RN09_4376

0.954

RN09_4373

0.939

FadD3

0.924

RN09_4324

0.799

RN09_4338

0.771

RN09_4336

0.756

RN09_4335

0.749

Your Current Organism:

Mycobacterium tuberculosis variant africanum

NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BphC	BphD	RN09_4374	RN09_4375	Extradiol dioxygenase.	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	0.998
BphC	RN09_4324	RN09_4374	RN09_4324	Extradiol dioxygenase.	3-ketosteroid-9-alpha-hydroxylase oxygenase subunit.	0.897
BphC	RN09_4335	RN09_4374	RN09_4335	Extradiol dioxygenase.	4-hydroxy-2-oxovalerate aldolase; Overlaps another CDS with the same product name.	0.461
BphC	RN09_4336	RN09_4374	RN09_4336	Extradiol dioxygenase.	4-hydroxy-2-oxovalerate aldolase; Overlaps another CDS with the same product name.	0.466
BphC	RN09_4338	RN09_4374	RN09_4338	Extradiol dioxygenase.	Hydratase.	0.491
BphC	RN09_4373	RN09_4374	RN09_4373	Extradiol dioxygenase.	Flavin-dependent monooxygenase reductase subunit HsaB.	0.999
BphC	RN09_4376	RN09_4374	RN09_4376	Extradiol dioxygenase.	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	0.973
BphC	RN09_4377	RN09_4374	RN09_4377	Extradiol dioxygenase.	Flavin-dependent monooxygenase oxygenase subunit HsaA; Overlaps another CDS with the same product name.	0.968
BphC	RN09_4378	RN09_4374	RN09_4378	Extradiol dioxygenase.	Flavin-dependent monooxygenase oxygenase subunit HsaA; Overlaps another CDS with the same product name.	0.996
BphD	BphC	RN09_4375	RN09_4374	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	Extradiol dioxygenase.	0.998
BphD	FadD3	RN09_4375	RN09_4364	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	fatty-acid--CoA ligase FadD3.	0.924
BphD	RN09_4324	RN09_4375	RN09_4324	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	3-ketosteroid-9-alpha-hydroxylase oxygenase subunit.	0.799
BphD	RN09_4335	RN09_4375	RN09_4335	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	4-hydroxy-2-oxovalerate aldolase; Overlaps another CDS with the same product name.	0.749
BphD	RN09_4336	RN09_4375	RN09_4336	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	4-hydroxy-2-oxovalerate aldolase; Overlaps another CDS with the same product name.	0.756
BphD	RN09_4338	RN09_4375	RN09_4338	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	Hydratase.	0.771
BphD	RN09_4373	RN09_4375	RN09_4373	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	Flavin-dependent monooxygenase reductase subunit HsaB.	0.939
BphD	RN09_4376	RN09_4375	RN09_4376	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	0.954
BphD	RN09_4377	RN09_4375	RN09_4377	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	Flavin-dependent monooxygenase oxygenase subunit HsaA; Overlaps another CDS with the same product name.	0.968
BphD	RN09_4378	RN09_4375	RN09_4378	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	Flavin-dependent monooxygenase oxygenase subunit HsaA; Overlaps another CDS with the same product name.	0.967
FadD3	BphD	RN09_4364	RN09_4375	fatty-acid--CoA ligase FadD3.	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.	0.924