Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MoxR2 | RN09_4505 | RN09_4509 | RN09_4505 | Methanol dehydrogenase transcriptional regulator MoxR. | Transmembrane protein. | 0.738 |
MoxR2 | RN09_4506 | RN09_4509 | RN09_4506 | Methanol dehydrogenase transcriptional regulator MoxR. | Membrane protein. | 0.796 |
MoxR2 | RN09_4508 | RN09_4509 | RN09_4508 | Methanol dehydrogenase transcriptional regulator MoxR. | Hypothetical protein. | 0.857 |
MoxR2 | RN09_4510 | RN09_4509 | RN09_4510 | Methanol dehydrogenase transcriptional regulator MoxR. | Membrane protein. | 0.930 |
MoxR2 | RN09_4511 | RN09_4509 | RN09_4511 | Methanol dehydrogenase transcriptional regulator MoxR. | Transmembrane protein. | 0.494 |
MoxR2 | RN09_4512 | RN09_4509 | RN09_4512 | Methanol dehydrogenase transcriptional regulator MoxR. | Membrane protein. | 0.437 |
Pra | RN09_4511 | RN09_1337 | RN09_4511 | Hypothetical protein. | Transmembrane protein. | 0.495 |
RN09_0218 | RN09_4511 | RN09_0218 | RN09_4511 | Mce associated transmembrane protein. | Transmembrane protein. | 0.465 |
RN09_4505 | MoxR2 | RN09_4505 | RN09_4509 | Transmembrane protein. | Methanol dehydrogenase transcriptional regulator MoxR. | 0.738 |
RN09_4505 | RN09_4506 | RN09_4505 | RN09_4506 | Transmembrane protein. | Membrane protein. | 0.969 |
RN09_4505 | RN09_4508 | RN09_4505 | RN09_4508 | Transmembrane protein. | Hypothetical protein. | 0.856 |
RN09_4505 | RN09_4510 | RN09_4505 | RN09_4510 | Transmembrane protein. | Membrane protein. | 0.895 |
RN09_4505 | RN09_4511 | RN09_4505 | RN09_4511 | Transmembrane protein. | Transmembrane protein. | 0.738 |
RN09_4505 | RN09_4512 | RN09_4505 | RN09_4512 | Transmembrane protein. | Membrane protein. | 0.761 |
RN09_4506 | MoxR2 | RN09_4506 | RN09_4509 | Membrane protein. | Methanol dehydrogenase transcriptional regulator MoxR. | 0.796 |
RN09_4506 | RN09_4505 | RN09_4506 | RN09_4505 | Membrane protein. | Transmembrane protein. | 0.969 |
RN09_4506 | RN09_4508 | RN09_4506 | RN09_4508 | Membrane protein. | Hypothetical protein. | 0.936 |
RN09_4506 | RN09_4510 | RN09_4506 | RN09_4510 | Membrane protein. | Membrane protein. | 0.936 |
RN09_4506 | RN09_4511 | RN09_4506 | RN09_4511 | Membrane protein. | Transmembrane protein. | 0.789 |
RN09_4506 | RN09_4512 | RN09_4506 | RN09_4512 | Membrane protein. | Membrane protein. | 0.780 |
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