STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmbCArabinosyltransferase C. (482 aa)    
Predicted Functional Partners:
RN09_4633
Overlaps another CDS with the same product name.
     0.993
RN09_4634
Overlaps another CDS with the same product name.
     0.993
RN09_4632
Arabinofuranosyltransferase.
 
  
 0.970
RN09_4636
Arabinosyltransferase A.
    0.967
RN09_4652
Terminal beta-(1->2)-arabinofuranosyltransferase.
  
  
 0.854
RN09_4628
GtrA family protein.
 
   
 0.848
acpP
Meromycolate extension acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.847
RN09_3258
Alpha-(1->3)-arabinofuranosyltransferase.
  
   
 0.815
RN09_4649
Membrane protein.
 
   0.804
Pks13
Polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.801
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.