Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN09_4656Galactofuranosyl transferase GlfT; Overlaps another CDS with the same product name. (190 aa)    
Predicted Functional Partners:
GlfT
Galactofuranosyl transferase GlfT; Overlaps another CDS with the same product name.
     0.994
Glf
UDP-galactopyranose mutase.
 
  
 0.961
RN09_4653
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
  
  
 0.910
RN09_4621
Galactofuranosyl transferase GlfT.
 
   
 0.870
RN09_4652
Terminal beta-(1->2)-arabinofuranosyltransferase.
 
  
 0.834
RN09_4654
Decaprenylphosphoryl-5-phosphoribose phosphatase.
     
 0.822
RfbD
O-antigen/lipopolysaccharide ABC transporter permease RfbD.
 
  
 0.734
RN09_4636
Arabinosyltransferase A.
  
   
 0.604
RN09_4649
Membrane protein.
 
 
 
 0.591
RN09_0256
Hypothetical protein.
  
 
 
 0.583
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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