STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN09_4656Galactofuranosyl transferase GlfT; Overlaps another CDS with the same product name. (190 aa)    
Predicted Functional Partners:
GlfT
Galactofuranosyl transferase GlfT; Overlaps another CDS with the same product name.
     0.994
Glf
UDP-galactopyranose mutase.
 
  
 0.967
RN09_4653
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
  
  
 0.915
RN09_4621
Galactofuranosyl transferase GlfT.
 
   
 0.901
RN09_4654
Decaprenylphosphoryl-5-phosphoribose phosphatase.
     
 0.837
RN09_4652
Terminal beta-(1->2)-arabinofuranosyltransferase.
 
  
 0.829
RfbD
O-antigen/lipopolysaccharide ABC transporter permease RfbD.
 
  
 0.763
RN09_3258
Alpha-(1->3)-arabinofuranosyltransferase.
  
   
 0.628
RN09_4632
Arabinofuranosyltransferase.
 
   
 0.618
RN09_4649
Membrane protein.
 
 
 
 0.615
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.