Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GlfUDP-galactopyranose mutase. (399 aa)    
Predicted Functional Partners:
GlfT
Galactofuranosyl transferase GlfT; Overlaps another CDS with the same product name.
 
  
 0.965
RN09_4656
Galactofuranosyl transferase GlfT; Overlaps another CDS with the same product name.
 
  
 0.961
GalE1
UDP-glucose 4-epimerase.
    
 0.951
GalE2
UDP-glucose 4-epimerase GalE.
    
 0.950
RN09_4621
Galactofuranosyl transferase GlfT.
 
 
 0.937
GalT
Hypothetical protein.
    
  0.904
RmlA
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.885
RmlC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.881
RN09_4653
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
     
 0.873
RN09_4654
Decaprenylphosphoryl-5-phosphoribose phosphatase.
     
 0.872
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.