close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN09_4665Acyltransferase; Overlaps another CDS with the same product name. (269 aa)    
Predicted Functional Partners:
RN09_4664
Acyltransferase; Overlaps another CDS with the same product name.
 
    
0.888
RN09_4662
Hypothetical protein.
       0.829
RN09_4663
Acyltransferase.
 
    
0.820
RN09_4666
Phosphotransferase.
       0.547
Fas
Fatty acid synthase; Overlaps another CDS with the same product name.
 
  
 0.483
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
  0.448
RN09_0136
Cation-transporter ATPase I; Overlaps another CDS with the same product name.
    
  0.445
CtpI
Cation-transporter ATPase I; Overlaps another CDS with the same product name.
    
  0.445
RN09_0138
Cation-transporter ATPase I; Overlaps another CDS with the same product name.
    
  0.445
CtpH
Metal cation transporting ATPase H.
    
  0.445
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
Server load: medium (48%) [HD]