Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
GltBGlutamate synthase large subunit. (1527 aa)    
Predicted Functional Partners:
FprB
ferredoxin/ferredoxin--NADP reductase.
  
 
 0.999
FadH
NADPH dependent 2,4-dienoyl-CoA reductase FadH.
  
 
 0.999
RN09_3772
NADPH-ferredoxin reductase FprA; Overlaps another CDS with the same product name.
  
 
 0.999
FprA
NADPH-ferredoxin reductase FprA; Overlaps another CDS with the same product name.
  
 
 0.999
GltD
Glutamate synthase small subunit.
 0.999
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
  
 
 0.989
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.984
GlnA3
Glutamine synthetase GlnA.
  
 
 0.973
GlnA1
Glutamine synthetase; Overlaps another CDS with the same product name.
  
 
 0.973
GlnA2
Glutamine synthetase.
  
 
 0.973
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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