STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWC11_00310Histidine kinase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)    
Predicted Functional Partners:
ORV91913.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.947
ORV90748.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.920
ORV93827.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.917
ORV85057.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.915
ORV88436.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.890
ORV92373.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.769
ORV81530.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.692
ORV81531.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.684
ORV93851.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.683
ORV93761.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.679
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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