STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV94674.1L-lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)    
Predicted Functional Partners:
ORV92283.1
Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.897
ORV80975.1
Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.890
ORV90146.1
Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.889
ORV94663.1
ornithine-acyl-ACP acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.842
ORV94673.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
     
 0.830
AWC11_12610
Non-ribosomal peptide synthetase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.742
ORV92768.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.690
ORV80977.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.657
ORV84059.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.656
ORV87269.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.655
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.