STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV94555.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)    
Predicted Functional Partners:
ORV94557.1
Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.914
ORV94554.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.883
ORV92768.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.881
ORV94291.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.869
ORV92769.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.869
ORV90148.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.869
ORV84711.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.869
ORV94551.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
ORV94552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.838
ORV94553.1
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.827
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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