STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV93682.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (456 aa)    
Predicted Functional Partners:
ORV92768.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.962
ORV86814.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.935
ORV93681.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.920
ORV85986.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.874
ORV94563.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.866
ORV94564.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.866
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.823
ORV84060.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.812
ORV93679.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.801
ORV89280.1
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.