STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV93446.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)    
Predicted Functional Partners:
ORV93509.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.978
ORV90222.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.963
ORV93458.1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.963
ORV93445.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.954
ORV93443.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.947
ORV93444.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.940
ORV93442.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.924
ORV94563.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.831
ORV94564.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.831
ORV85986.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.827
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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