Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AWC11_14070 | ORV82290.1 | AWC11_14070 | AWC11_23955 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| AWC11_14070 | ORV92368.1 | AWC11_14070 | AWC11_08240 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.535 |
| ORV81543.1 | ORV92368.1 | AWC11_26555 | AWC11_08240 | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| ORV82290.1 | AWC11_14070 | AWC11_23955 | AWC11_14070 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| ORV82290.1 | ORV83595.1 | AWC11_23955 | AWC11_01755 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| ORV82290.1 | ORV92368.1 | AWC11_23955 | AWC11_08240 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.671 |
| ORV82290.1 | ORV93752.1 | AWC11_23955 | AWC11_05660 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.904 |
| ORV83595.1 | ORV82290.1 | AWC11_01755 | AWC11_23955 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| ORV83595.1 | ORV92368.1 | AWC11_01755 | AWC11_08240 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
| ORV83595.1 | ORV92968.1 | AWC11_01755 | AWC11_06870 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.480 |
| ORV83595.1 | ORV93267.1 | AWC11_01755 | AWC11_06680 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.464 |
| ORV83595.1 | ORV93447.1 | AWC11_01755 | AWC11_05965 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.488 |
| ORV92368.1 | AWC11_14070 | AWC11_08240 | AWC11_14070 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.535 |
| ORV92368.1 | ORV81543.1 | AWC11_08240 | AWC11_26555 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| ORV92368.1 | ORV82290.1 | AWC11_08240 | AWC11_23955 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.671 |
| ORV92368.1 | ORV83595.1 | AWC11_08240 | AWC11_01755 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
| ORV92368.1 | ORV92369.1 | AWC11_08240 | AWC11_08245 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.569 |
| ORV92368.1 | ORV92968.1 | AWC11_08240 | AWC11_06870 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.628 |
| ORV92368.1 | ORV93022.1 | AWC11_08240 | AWC11_06935 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.547 |
| ORV92368.1 | ORV93267.1 | AWC11_08240 | AWC11_06680 | LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.547 |
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