STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV90046.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
ORV94291.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.768
ORV92769.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.768
ORV90148.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.768
ORV84711.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.768
ORV85881.1
Ferredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.730
ORV80853.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.730
ORV84060.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.709
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
  0.691
ORV86783.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
  0.689
ORV88942.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.676
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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