STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV88399.1SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (298 aa)    
Predicted Functional Partners:
ORV88398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
ORV88396.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
ORV88397.1
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
ORV92082.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.559
ORV88395.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
ORV88400.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.481
ORV88401.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.450
ORV88404.1
F420-dependent methylene-tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
ORV88403.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
ORV88402.1
FMNH2-dependent monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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