STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV88476.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
ORV91559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.793
ORV90265.1
Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the group II decarboxylase family.
   
 0.748
ORV84711.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.737
ORV92769.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.716
ORV90148.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.715
ORV94291.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.714
ORV80979.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.698
ORV92768.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.689
ORV92770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.685
ORV82699.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.678
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.