STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV86828.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
ORV86826.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.952
ORV86827.1
decaprenylphosphoryl-beta-D-ribose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
ORV86824.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.939
ORV86825.1
Arabinofuranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.888
ORV86829.1
Nucleoside diphosphate kinase regulator; Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.785
ORV86819.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.777
ORV86818.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.765
ORV86808.1
Phosphoribose diphosphate--decaprenyl-phosphate phosphoribosyltransferase; Catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family.
 
     0.749
ORV95441.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.730
ORV86833.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.633
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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