Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AWC11_05765 | ORV86159.1 | AWC11_05765 | AWC11_18085 | Arsenic transporter; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
ORV83052.1 | ORV86159.1 | AWC11_22890 | AWC11_18085 | Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
ORV85627.1 | ORV86159.1 | AWC11_19270 | AWC11_18085 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
ORV86159.1 | AWC11_05765 | AWC11_18085 | AWC11_05765 | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arsenic transporter; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
ORV86159.1 | ORV83052.1 | AWC11_18085 | AWC11_22890 | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. | 0.429 |
ORV86159.1 | ORV85627.1 | AWC11_18085 | AWC11_19270 | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | 0.590 |
ORV86159.1 | ORV89337.1 | AWC11_18085 | AWC11_14140 | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Na+/H+ transporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. | 0.414 |
ORV89337.1 | ORV86159.1 | AWC11_14140 | AWC11_18085 | Na+/H+ transporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |