Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV83915.1Cell motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)    
Predicted Functional Partners:
ORV83914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.994
ORV83913.1
Type VII secretion protein EsxS; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.906
ORV83917.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.894
ORV83916.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.862
ORV83918.1
Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.860
ORV83912.1
Type VII secretion protein EsxH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.788
ORV83910.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.643
ORV83911.1
Secretion protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.624
ORV83919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.599
ORV83909.1
Subtilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.535
Your Current Organism:
Mycobacterium interjectum
NCBI taxonomy Id: 33895
Other names: ATCC 51457, CCUG 37514, DSM 44064, M. interjectum, strain 4185/92
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