STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pulP-2Type II secretion system protein PulP, putative. (218 aa)    
Predicted Functional Partners:
pulE-2
Type II secretion system ATPase PulE.
       0.773
pulM-2
Type II secretion system ATPase PulM, putative.
       0.773
pulN-2
Type II secretion system protein PulN, putative.
       0.773
pulO-2
Type II secretion system protein PulO, putative.
       0.773
pulF-2
Type II secretion system inner membrane protein PulF.
       0.768
pulQ-2
Type II secretion system secretin lipoprotein PulQ; Belongs to the bacterial secretin family.
       0.675
pulG-2
Type II secretion system pseudopilin PulG.
       0.675
oxpG-2
Type II secretion system pseudopilin OxpG.
       0.675
Pcar_0129
RHS repeat protein.
       0.414
Pcar_3156
Hypothetical protein.
       0.414
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.