STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcar_0451Organic solvent tolerance ABC transporter, periplasmic substrate-binding protein. (212 aa)    
Predicted Functional Partners:
Pcar_0449
ABC transporter, periplasmic substrate-binding protein, MCE family.
 
 0.997
Pcar_0447
ABC transporter, membrane protein of unknown function DUF140.
 
 
 0.965
Pcar_0448
Organic solvent tolerance ABC transporter, ATP-binding protein.
 
 
 0.964
Pcar_0450
VacJ family lipoprotein.
 
 
 
 0.958
Pcar_2751
ABC transporter, periplasmic substrate-binding protein.
 
 0.945
Pcar_2749
ABC transporter, membrane protein of unknown function DUF140.
 
 
 0.890
Pcar_2750
ABC transporter, ATP-binding protein.
 
 
 0.875
Pcar_0452
Cyclic nucleotide-binding protein.
 
     0.837
Pcar_1775
VacJ family lipoprotein.
 
 
 
 0.770
Pcar_1252
OmpH-like outer membrane protein, putative.
  
   
 0.452
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.