STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcar_0820Membrane protein, putative. (361 aa)    
Predicted Functional Partners:
Pcar_0821
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.969
yedF
Selenium metabolism protein YedF, putative; Belongs to the sulfur carrier protein TusA family.
 
  
 0.802
selD
Selenide, water dikinase, selenocysteine-containing; Synthesizes selenophosphate from selenide and ATP.
 
  
 0.709
cysN
Sulfate adenylyltransferase, subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.676
Pcar_0429
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein, rhodanese homology, sulfur carrier, and DsrE-related domain-containing; Belongs to the sulfur carrier protein TusA family.
  
  
 0.580
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.578
selB
Selenocysteine-specific translation elongation factor.
 
   
 0.539
Pcar_0304
Cysteine desulfurase family protein.
 
     0.502
Pcar_0234
Cysteine desulfurase family protein.
 
     0.427
Pcar_1729
Cysteine desulfurase family protein.
 
     0.417
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.