STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vorB2-oxoacid:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit. (252 aa)    
Predicted Functional Partners:
vorA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit.
 
 0.999
vorC
2-oxoacid:ferredoxin oxidoreductase, gamma subunit.
 0.999
korC
2-oxoglutarate:ferredoxin oxidoreductase, gamma subunit.
 0.995
korA
2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit.
 
 0.995
por-1
Pyruvate:ferredoxin/flavodoxin oxidoreductase.
  
 0.993
por-2
Pyruvate:ferredoxin/flavodoxin oxidoreductase.
  
 0.993
vorD
2-oxoacid:ferredoxin oxidoreductase, ferredoxin subunit.
 
 
 0.989
Pcar_1238
2-oxoacid:ferredoxin oxidoreductase, gamma and ferredoxin subunit.
  
 0.981
Pcar_2248
2-oxoacid:ferredoxin oxidoreductase, ferredoxin subunit.
 
 
 0.976
korD
2-oxoglutarate:ferredoxin oxidoreductase, ferredoxin subunit.
 
 
 0.945
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.