STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcar_1578Transporter, arsenite efflux pump ACR3 family. (323 aa)    
Predicted Functional Partners:
Pcar_1579
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein, rhodanese homology domain-containing.
     
 0.579
Pcar_1369
Radical SAM domain iron-sulfur cluster-binding oxidoreductase.
  
     0.531
arsC-2
Arsenate reductase and protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.515
arsC-1
Arsenate reductase and protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.515
Pcar_2448
Flavoprotein, putative.
  
  
 0.486
Pcar_0511
Glutaredoxin-dependent arsenate reductase-related protein; Belongs to the ArsC family.
     
 0.464
Pcar_1925
Helix-turn-helix metal-dependent transcriptional regulator, ArsR subfamily, and SAM-dependent methyltransferase, type 11.
 
  
 0.460
hisF
Imidazoleglycerol-phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
      
 0.400
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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