STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcar_2105GTPase, putative. (228 aa)    
Predicted Functional Partners:
Pcar_2106
ABC transporter, ATP-binding protein.
 
    0.961
Pcar_2104
Protein of unknown function, DUF1858-containing.
 
     0.952
nuoBCD
NADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 20 kDa subunit family. In the C-terminal section; belongs to the complex I 49 [...]
   
 
 0.546
Pcar_0148
ABC transporter, periplasmic metal-binding protein, TroA_e family.
 
     0.537
actB
Menaquinol oxidoreductase complex ACIII, molybdopterin-binding-like and iron-sulfur cluster-binding subunit ActB.
  
  
 0.524
Pcar_0153
ABC transporter, periplasmic metal-binding protein, TroA_e family.
 
     0.514
Pcar_2076
Peptidylprolyl cis-trans isomerase, FKBP-type.
    
 
 0.481
Pcar_2077
Peptidylprolyl cis-trans isomerase, FKBP-type.
    
 
 0.481
Pcar_2669
Peptidylprolyl cis-trans isomerase, FKBP-type, putative.
    
 
 0.481
nifB
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifB.
       0.461
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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