Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pilDType IV prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (259 aa)    
Predicted Functional Partners:
pilC
Type IV pilus inner membrane protein PilC.
 
  
 0.888
dprA
DNA protection single-strand-binding protein DprA.
  
  
 0.861
Pcar_1043
Competence protein, ComEC-related, putative.
  
  
 0.843
mshG
Type IV pilus inner membrane protein MshG.
 
  
 0.836
pulF-2
Type II secretion system inner membrane protein PulF.
 
  
 0.830
pihG
Type IV pilus inner membrane protein PihG.
 
  
 0.830
pilB
Type IV pilus biogenesis ATPase PilB.
 
 
 0.826
pulF-1
Type II secretion system inner membrane protein PulF.
 
  
 0.825
pilA-1
Geopilin.
 
   
 0.807
pilT-4
Twitching motility pilus retraction ATPase.
 
   
 0.792
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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