Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pcar_2331 | Pcar_2332 | Pcar_2331 | Pcar_2332 | thioredoxin/NifU-like domain protein. | HAD superfamily hydrolase. | 0.560 |
Pcar_2331 | ugpQ-1 | Pcar_2331 | Pcar_2333 | thioredoxin/NifU-like domain protein. | Glycerophosphodiester phosphodiesterase. | 0.415 |
Pcar_2332 | Pcar_2331 | Pcar_2332 | Pcar_2331 | HAD superfamily hydrolase. | thioredoxin/NifU-like domain protein. | 0.560 |
Pcar_2332 | glpX | Pcar_2332 | Pcar_2334 | HAD superfamily hydrolase. | Fructose 1,6-bisphosphatase. | 0.408 |
Pcar_2332 | ugpQ-1 | Pcar_2332 | Pcar_2333 | HAD superfamily hydrolase. | Glycerophosphodiester phosphodiesterase. | 0.567 |
eutBC-1 | eutBC-2 | Pcar_0491 | Pcar_0467 | Ethanolamine ammonia-lyase. | Ethanolamine ammonia-lyase. | 0.997 |
eutBC-1 | ugpQ-1 | Pcar_0491 | Pcar_2333 | Ethanolamine ammonia-lyase. | Glycerophosphodiester phosphodiesterase. | 0.900 |
eutBC-1 | ugpQ-2 | Pcar_0491 | Pcar_1855 | Ethanolamine ammonia-lyase. | Glycerophosphodiester phosphodiesterase. | 0.913 |
eutBC-2 | eutBC-1 | Pcar_0467 | Pcar_0491 | Ethanolamine ammonia-lyase. | Ethanolamine ammonia-lyase. | 0.997 |
eutBC-2 | ugpQ-1 | Pcar_0467 | Pcar_2333 | Ethanolamine ammonia-lyase. | Glycerophosphodiester phosphodiesterase. | 0.900 |
eutBC-2 | ugpQ-2 | Pcar_0467 | Pcar_1855 | Ethanolamine ammonia-lyase. | Glycerophosphodiester phosphodiesterase. | 0.913 |
glpX | Pcar_2332 | Pcar_2334 | Pcar_2332 | Fructose 1,6-bisphosphatase. | HAD superfamily hydrolase. | 0.408 |
glpX | ugpQ-1 | Pcar_2334 | Pcar_2333 | Fructose 1,6-bisphosphatase. | Glycerophosphodiester phosphodiesterase. | 0.496 |
ugpQ-1 | Pcar_2331 | Pcar_2333 | Pcar_2331 | Glycerophosphodiester phosphodiesterase. | thioredoxin/NifU-like domain protein. | 0.415 |
ugpQ-1 | Pcar_2332 | Pcar_2333 | Pcar_2332 | Glycerophosphodiester phosphodiesterase. | HAD superfamily hydrolase. | 0.567 |
ugpQ-1 | eutBC-1 | Pcar_2333 | Pcar_0491 | Glycerophosphodiester phosphodiesterase. | Ethanolamine ammonia-lyase. | 0.900 |
ugpQ-1 | eutBC-2 | Pcar_2333 | Pcar_0467 | Glycerophosphodiester phosphodiesterase. | Ethanolamine ammonia-lyase. | 0.900 |
ugpQ-1 | glpX | Pcar_2333 | Pcar_2334 | Glycerophosphodiester phosphodiesterase. | Fructose 1,6-bisphosphatase. | 0.496 |
ugpQ-1 | ugpQ-2 | Pcar_2333 | Pcar_1855 | Glycerophosphodiester phosphodiesterase. | Glycerophosphodiester phosphodiesterase. | 0.924 |
ugpQ-2 | eutBC-1 | Pcar_1855 | Pcar_0491 | Glycerophosphodiester phosphodiesterase. | Ethanolamine ammonia-lyase. | 0.913 |
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