Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pcar_1522 | Pcar_2590 | Pcar_1522 | Pcar_2590 | Glycosyltransferase, Cap1E-like family. | Glycosyltransferase. | 0.544 |
Pcar_1527 | Pcar_2590 | Pcar_1527 | Pcar_2590 | Glycosyltransferase, Cap1E-like family. | Glycosyltransferase. | 0.565 |
Pcar_2590 | Pcar_1522 | Pcar_2590 | Pcar_1522 | Glycosyltransferase. | Glycosyltransferase, Cap1E-like family. | 0.544 |
Pcar_2590 | Pcar_1527 | Pcar_2590 | Pcar_1527 | Glycosyltransferase. | Glycosyltransferase, Cap1E-like family. | 0.565 |
Pcar_2590 | Pcar_2591 | Pcar_2590 | Pcar_2591 | Glycosyltransferase. | Glycosyltransferase, putative. | 0.788 |
Pcar_2590 | Pcar_2592 | Pcar_2590 | Pcar_2592 | Glycosyltransferase. | Glycosyltransferase. | 0.495 |
Pcar_2590 | rmlA | Pcar_2590 | Pcar_2595 | Glycosyltransferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.455 |
Pcar_2590 | rmlB | Pcar_2590 | Pcar_2593 | Glycosyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.584 |
Pcar_2590 | rmlC | Pcar_2590 | Pcar_2596 | Glycosyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.490 |
Pcar_2590 | rmlD | Pcar_2590 | Pcar_2594 | Glycosyltransferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.404 |
Pcar_2591 | Pcar_2590 | Pcar_2591 | Pcar_2590 | Glycosyltransferase, putative. | Glycosyltransferase. | 0.788 |
Pcar_2591 | Pcar_2592 | Pcar_2591 | Pcar_2592 | Glycosyltransferase, putative. | Glycosyltransferase. | 0.499 |
Pcar_2591 | rmlA | Pcar_2591 | Pcar_2595 | Glycosyltransferase, putative. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.485 |
Pcar_2591 | rmlB | Pcar_2591 | Pcar_2593 | Glycosyltransferase, putative. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.694 |
Pcar_2591 | rmlC | Pcar_2591 | Pcar_2596 | Glycosyltransferase, putative. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.517 |
Pcar_2591 | rmlD | Pcar_2591 | Pcar_2594 | Glycosyltransferase, putative. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.672 |
Pcar_2592 | Pcar_2590 | Pcar_2592 | Pcar_2590 | Glycosyltransferase. | Glycosyltransferase. | 0.495 |
Pcar_2592 | Pcar_2591 | Pcar_2592 | Pcar_2591 | Glycosyltransferase. | Glycosyltransferase, putative. | 0.499 |
Pcar_2592 | rmlA | Pcar_2592 | Pcar_2595 | Glycosyltransferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.455 |
Pcar_2592 | rmlB | Pcar_2592 | Pcar_2593 | Glycosyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.738 |
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