STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsC-1Arsenate reductase and protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (157 aa)    
Predicted Functional Partners:
Pcar_1302
TPR domain protein.
  
 
 0.734
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.706
Pcar_1464
Polysaccharide chain length determinant protein and protein tyrosine kinase.
  
 
 0.642
Pcar_1539
Polysaccharide chain length determinant protein and protein tyrosine kinase.
  
 
 0.642
Pcar_1578
Transporter, arsenite efflux pump ACR3 family.
  
  
 0.515
Pcar_2603
Hypothetical protein.
       0.513
Pcar_0429
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein, rhodanese homology, sulfur carrier, and DsrE-related domain-containing; Belongs to the sulfur carrier protein TusA family.
   
 
 0.505
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.455
Pcar_0912
Helix-turn-helix transcriptional regulator, ArsR family, rhodanese homology domain-containing.
  
 
 0.452
Pcar_1579
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein, rhodanese homology domain-containing.
   
 
 0.420
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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