STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcar_2653Undecaprenyl-phosphate glycosyltransferase, putative. (389 aa)    
Predicted Functional Partners:
Pcar_2652
Acyltransferase, putative.
     0.982
acpP-1
Acyl carrier protein.
 
   0.954
Pcar_2649
3-oxoacyl-(acyl carrier protein) synthase II-related protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 
 0.917
Pcar_2657
Exporter, putative.
 
    0.909
Pcar_2658
Outer membrane lipoprotein carrier/sorting protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.908
Pcar_2654
acyl-CoA thioesterase.
 
     0.904
Pcar_2659
(3R)-hydroxyacyl-(acyl carrier protein) dehydratase-related protein.
 
     0.899
fabZ-3
(3R)-hydroxyacyl-(acyl carrier protein) dehydratase, putative.
 
     0.895
fabF-4
3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.848
Pcar_2648
acyl-CoA synthetase, AMP-forming.
 
 
   0.841
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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