STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0039Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pca:Pcar_1925 transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 family. (309 aa)    
Predicted Functional Partners:
Ppro_2900
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: gme:Gmet_2772 copper-translocating P-type ATPase:heavy metal translocating P-type ATPase.
  
  
 0.668
Ppro_3365
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pca:Pcar_2776 2-acyl-glycerophospho-ethanolamine acyltransferase.
 
   
 0.650
Ppro_1413
Methionine synthase (B12-dependent); PFAM: dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: gme:Gmet_0549 homocysteine S-methyltransferase.
 
   
 0.643
Ppro_0040
Hypothetical protein; KEGG: ade:Adeh_0876 methyltransferase type 11.
 
  
 0.625
Ppro_2491
PFAM: ROSMUCR transcriptional regulator; KEGG: gsu:GSU1863 transcriptional regulator, Ros/MucR family.
  
   
 0.598
Ppro_0842
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: gme:Gmet_0521 protein tyrosine phosphatase.
 
  
 0.586
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.577
Ppro_0283
PFAM: methylenetetrahydrofolate reductase; homocysteine S-methyltransferase; KEGG: gme:Gmet_0504 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
     
 0.563
Ppro_0298
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: gsu:GSU0097 pyruvate ferredoxin/flavodoxin oxidoreductase.
   
 
 0.553
Ppro_0646
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: gsu:GSU1698 TPR domain protein.
  
 
 0.540
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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