STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0060PFAM: protein of unknown function DUF81; KEGG: gka:GK1638 hypothetical protein. (250 aa)    
Predicted Functional Partners:
Ppro_0061
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mca:MCA0894 ABC transporter, ATP-binding/permease protein.
       0.773
Ppro_0062
KEGG: hma:rrnAC0622 hypothetical protein.
       0.773
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.706
Ppro_0058
Hypothetical protein.
       0.610
Ppro_0059
KEGG: cpe:CPE0469 hypothetical protein.
       0.610
Ppro_0063
TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bur:Bcep18194_A5495 sulfate adenylyltransferase, small subunit.
  
  
 0.568
Ppro_0056
Hpr(Ser) kinase/phosphatase; KEGG: hch:HCH_06050 hypothetical protein.
 
    0.544
Ppro_0057
PFAM: sulfotransferase; KEGG: mag:amb1455 Flavonol 3-sulfotransferase.
 
     0.534
pheT
KEGG: gme:Gmet_1416 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
     
 0.504
Ppro_0065
PFAM: peptidase U32; KEGG: gme:Gmet_0040 peptidase U32.
       0.437
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.