STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0100KEGG: atc:AGR_L_56 hypothetical protein. (235 aa)    
Predicted Functional Partners:
Ppro_0101
Hypothetical protein.
       0.782
Ppro_0099
PFAM: metallophosphoesterase.
       0.623
Ppro_2380
Hypothetical protein; KEGG: ecs:ECs4945 phage transposase.
  
     0.591
Ppro_0102
Hypothetical protein.
       0.572
Ppro_0103
Hypothetical protein.
       0.572
Ppro_0098
KEGG: tde:TDE0620 hypothetical protein.
       0.553
Ppro_0396
OmpA/MotB domain protein; PFAM: von Willebrand factor, type A; OmpA/MotB domain protein; KEGG: pae:PA1777 outer membrane protein OprF precursor.
  
     0.543
Ppro_0104
PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bps:BPSL3115 putative transcriptional regulator.
       0.528
Ppro_0097
Hypothetical protein.
       0.434
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.