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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0177PFAM: protein of unknown function UPF0270; KEGG: pca:Pcar_2862 hypothetical protein. (99 aa)    
Predicted Functional Partners:
Ppro_0175
PFAM: DNA/RNA non-specific endonuclease; KEGG: pol:Bpro_5415 DNA/RNA non-specific endonuclease.
       0.773
Ppro_0176
KEGG: pol:Bpro_5414 hypothetical protein.
       0.773
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.768
Ppro_0179
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.768
Ppro_0180
Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
       0.603
Ppro_2662
KEGG: gsu:GSU3120 hypothetical protein.
  
     0.534
Ppro_0181
KEGG: zmo:ZMO0901 hypothetical protein.
       0.531
Ppro_0174
KEGG: gme:Gmet_3045 Mg chelatase-related protein.
       0.515
Ppro_2534
KEGG: gsu:GSU1375 hypothetical protein.
  
     0.467
Ppro_2075
KEGG: gme:Gmet_0236 GreA/GreB family elongation factor.
  
     0.462
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.