STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0258KEGG: sat:SYN_01860 hypothetical membrane protein. (88 aa)    
Predicted Functional Partners:
Ppro_0255
PFAM: TraB pilus assembly family protein; KEGG: sat:SYN_01863 pilus assembly protein.
       0.768
Ppro_0256
KEGG: sat:SYN_01862 hypothetical protein.
       0.768
Ppro_0257
KEGG: sat:SYN_01861 hypothetical sex pilus assembly and synthesis protein.
       0.768
Ppro_0253
KEGG: sat:SYN_01865 sex pilus assembly protein.
       0.694
Ppro_0254
KEGG: sat:SYN_01864 hypothetical protein.
       0.694
Ppro_0250
KEGG: sat:SYN_01868 hypothetical cytosolic protein.
       0.691
Ppro_0251
KEGG: sat:SYN_01867 hypothetical protein.
       0.691
Ppro_0252
KEGG: sat:SYN_01866 hypothetical protein.
       0.691
Ppro_0259
KEGG: sat:SYN_01859 hypothetical membrane protein.
       0.656
Ppro_0261
PFAM: OmpA/MotB domain protein; KEGG: gsu:GSU2172 OmpA domain protein, putative.
       0.535
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.