STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0404PFAM: protein of unknown function DUF330; KEGG: sat:SYN_02067 hypothetical protein. (203 aa)    
Predicted Functional Partners:
Ppro_0402
PFAM: Paraquat-inducible protein A; KEGG: rme:Rmet_4089 hypothetical protein.
 
  
 0.963
Ppro_0401
PFAM: Paraquat-inducible protein A; KEGG: rme:Rmet_0581 paraquat-inducible protein A.
 
  
 0.962
Ppro_0403
PFAM: Mammalian cell entry related domain protein; KEGG: rme:Rmet_4088 mammalian cell entry related.
 
   
 0.961
Ppro_0400
KEGG: sat:SYN_02957 hypothetical membrane protein.
 
     0.709
Ppro_0395
KEGG: reu:Reut_A2150 hypothetical protein.
  
     0.653
Ppro_0405
PFAM: protein of unknown function UPF0118; KEGG: sat:SYN_02943 hypothetical membrane protein.
 
     0.624
Ppro_2816
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: gme:Gmet_0915 HNH endonuclease.
  
     0.567
Ppro_0408
KEGG: reu:Reut_A1205 hypothetical protein.
 
     0.500
Ppro_1433
KEGG: dar:Daro_2057 twin-arginine translocation pathway signal.
  
     0.456
Ppro_1558
KEGG: mca:MCA1869 hypothetical protein.
  
     0.456
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.