STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0806KEGG: mfa:Mfla_1600 hypothetical protein. (64 aa)    
Predicted Functional Partners:
Ppro_0805
KEGG: hch:HCH_00181 predicted periplasmic lipoprotein.
 
     0.660
Ppro_0809
Hypothetical protein; KEGG: tbd:Tbd_1441 type II secretion system protein G.
 
     0.524
Ppro_0818
PFAM: type II and III secretion system protein; KEGG: pca:Pcar_0870 type II secretory pathway component PulD-like; Belongs to the bacterial secretin family.
 
     0.514
Ppro_0804
PFAM: Endoribonuclease L-PSP; KEGG: bth:BT2475 putative translation initiation inhibitor.
       0.511
Ppro_0807
Hypothetical protein.
       0.463
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.